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Seti@Home optimized science apps and information  |  Optimized Seti@Home apps  |  Linux  |  Topic: Problems with initial public release of Linux Core 2 Duo 0 Members and 0 Guests are viewing this topic. « previous next »
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michael37
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Problems with initial public release of Linux Core 2 Duo
« on: 26 Mar 2007, 08:49:52 pm »

I have a Woodcrest server, and here is what I got for an error with Initial Public release SSE3-C2 server.

It seems to fault on each workunit.  The baseline OS is FC5.

[setiathome.berkeley.edu]# ./KWSN-R2.2B-SSE3-C2
*** glibc detected *** ./KWSN-R2.2B-SSE3-C2: free(): invalid next size (fast): 0x08275000 ***
======= Backtrace: =========
/lib/libc.so.6[0x164f18]
/lib/libc.so.6(__libc_free+0x79)[0x16841d]
./KWSN-R2.2B-SSE3-C2[0x80d1c9d]
./KWSN-R2.2B-SSE3-C2[0x80937cb]
./KWSN-R2.2B-SSE3-C2[0x80923cb]
./KWSN-R2.2B-SSE3-C2[0x81250b6]
/lib/libc.so.6(__libc_start_main+0xdc)[0x1167e4]
./KWSN-R2.2B-SSE3-C2[0x804c2c1]
======= Memory map: ========
00101000-0022d000 r-xp 00000000 fd:00 7267409                            /lib/libc-2.4.so
0022d000-00230000 r--p 0012b000 fd:00 7267409                            /lib/libc-2.4.so
00230000-00231000 rw-p 0012e000 fd:00 7267409                            /lib/libc-2.4.so
00231000-00234000 rw-p 00231000 00:00 0
004a9000-004c2000 r-xp 00000000 fd:00 7267949                            /lib/ld-2.4.so
004c2000-004c3000 r--p 00018000 fd:00 7267949                            /lib/ld-2.4.so
004c3000-004c4000 rw-p 00019000 fd:00 7267949                            /lib/ld-2.4.so
00d36000-00d38000 r-xp 00000000 fd:00 7267420                            /lib/libdl-2.4.so
00d38000-00d39000 r--p 00001000 fd:00 7267420                            /lib/libdl-2.4.so
00d39000-00d3a000 rw-p 00002000 fd:00 7267420                            /lib/libdl-2.4.so
00d3c000-00d5f000 r-xp 00000000 fd:00 7267440                            /lib/libm-2.4.so
00d5f000-00d60000 r--p 00022000 fd:00 7267440                            /lib/libm-2.4.so
00d60000-00d61000 rw-p 00023000 fd:00 7267440                            /lib/libm-2.4.so
00d63000-00d6e000 r-xp 00000000 fd:00 7267424                            /lib/libgcc_s-4.1.0-20060304.so.1
00d6e000-00d6f000 rw-p 0000a000 fd:00 7267424                            /lib/libgcc_s-4.1.0-20060304.so.1
00d71000-00d81000 r-xp 00000000 fd:00 7267422                            /lib/libpthread-2.4.so
00d81000-00d82000 r--p 0000f000 fd:00 7267422                            /lib/libpthread-2.4.so
00d82000-00d83000 rw-p 00010000 fd:00 7267422                            /lib/libpthread-2.4.so
00d83000-00d85000 rw-p 00d83000 00:00 0
08048000-08201000 r-xp 00000000 fd:00 12570738                           /var/tmp/boinc/projects/setiathome.berkeley.edu/KWSN-R2.2B-SSE3-C2
08201000-0820b000 rw-p 001b8000 fd:00 12570738                           /var/tmp/boinc/projects/setiathome.berkeley.edu/KWSN-R2.2B-SSE3-C2
0820b000-084ba000 rw-p 0820b000 00:00 0                                  [heap]
f3694000-f3715000 rw-p f3694000 00:00 0
f3715000-f3716000 ---p f3715000 00:00 0
f3716000-f390e000 rwxp f3716000 00:00 0
f390e000-f390f000 ---p f390e000 00:00 0
f390f000-f391f000 rwxp f390f000 00:00 0
f5300000-f5321000 rw-p f5300000 00:00 0
f5321000-f5400000 ---p f5321000 00:00 0
f546a000-f7523000 rw-p f546a000 00:00 0
f7523000-f7524000 ---p f7523000 00:00 0
f7524000-f7f24000 rwxp f7524000 00:00 0
f7f24000-f7f26000 rw-p f7f24000 00:00 0
f7f3a000-f7f3c000 rw-p f7f3a000 00:00 0
fffee000-ffffe000 rwxp fffee000 00:00 0                                  [stack]
ffffe000-fffff000 r-xp ffffe000 00:00 0
Aborted

[setiathome.berkeley.edu]# ldd KWSN-R2.2B-SSE3-C2
         (0xffffe000)
        libdl.so.2 => /lib/libdl.so.2 (0x00d36000)
        libm.so.6 => /lib/libm.so.6 (0x00d3c000)
        libpthread.so.0 => /lib/libpthread.so.0 (0x00d71000)
        libc.so.6 => /lib/libc.so.6 (0x00101000)
        /lib/ld-linux.so.2 (0x004a9000)
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #1 on: 26 Mar 2007, 08:53:52 pm »

I have a Woodcrest server, and here is what I got for an error with Initial Public release SSE3-C2 server.

It seems to fault on each workunit.  The baseline OS is FC5.

[setiathome.berkeley.edu]# ./KWSN-R2.2B-SSE3-C2
*** glibc detected *** ./KWSN-R2.2B-SSE3-C2: free(): invalid next size (fast): 0x08275000 ***
======= Backtrace: =========
/lib/libc.so.6[0x164f18]
/lib/libc.so.6(__libc_free+0x79)[0x16841d]
./KWSN-R2.2B-SSE3-C2[0x80d1c9d]
./KWSN-R2.2B-SSE3-C2[0x80937cb]
./KWSN-R2.2B-SSE3-C2[0x80923cb]
./KWSN-R2.2B-SSE3-C2[0x81250b6]
/lib/libc.so.6(__libc_start_main+0xdc)[0x1167e4]
./KWSN-R2.2B-SSE3-C2[0x804c2c1]
======= Memory map: ========
00101000-0022d000 r-xp 00000000 fd:00 7267409                            /lib/libc-2.4.so
0022d000-00230000 r--p 0012b000 fd:00 7267409                            /lib/libc-2.4.so
00230000-00231000 rw-p 0012e000 fd:00 7267409                            /lib/libc-2.4.so
00231000-00234000 rw-p 00231000 00:00 0
004a9000-004c2000 r-xp 00000000 fd:00 7267949                            /lib/ld-2.4.so
004c2000-004c3000 r--p 00018000 fd:00 7267949                            /lib/ld-2.4.so
004c3000-004c4000 rw-p 00019000 fd:00 7267949                            /lib/ld-2.4.so
00d36000-00d38000 r-xp 00000000 fd:00 7267420                            /lib/libdl-2.4.so
00d38000-00d39000 r--p 00001000 fd:00 7267420                            /lib/libdl-2.4.so
00d39000-00d3a000 rw-p 00002000 fd:00 7267420                            /lib/libdl-2.4.so
00d3c000-00d5f000 r-xp 00000000 fd:00 7267440                            /lib/libm-2.4.so
00d5f000-00d60000 r--p 00022000 fd:00 7267440                            /lib/libm-2.4.so
00d60000-00d61000 rw-p 00023000 fd:00 7267440                            /lib/libm-2.4.so
00d63000-00d6e000 r-xp 00000000 fd:00 7267424                            /lib/libgcc_s-4.1.0-20060304.so.1
00d6e000-00d6f000 rw-p 0000a000 fd:00 7267424                            /lib/libgcc_s-4.1.0-20060304.so.1
00d71000-00d81000 r-xp 00000000 fd:00 7267422                            /lib/libpthread-2.4.so
00d81000-00d82000 r--p 0000f000 fd:00 7267422                            /lib/libpthread-2.4.so
00d82000-00d83000 rw-p 00010000 fd:00 7267422                            /lib/libpthread-2.4.so
00d83000-00d85000 rw-p 00d83000 00:00 0
08048000-08201000 r-xp 00000000 fd:00 12570738                           /var/tmp/boinc/projects/setiathome.berkeley.edu/KWSN-R2.2B-SSE3-C2
08201000-0820b000 rw-p 001b8000 fd:00 12570738                           /var/tmp/boinc/projects/setiathome.berkeley.edu/KWSN-R2.2B-SSE3-C2
0820b000-084ba000 rw-p 0820b000 00:00 0                                  [heap]
f3694000-f3715000 rw-p f3694000 00:00 0
f3715000-f3716000 ---p f3715000 00:00 0
f3716000-f390e000 rwxp f3716000 00:00 0
f390e000-f390f000 ---p f390e000 00:00 0
f390f000-f391f000 rwxp f390f000 00:00 0
f5300000-f5321000 rw-p f5300000 00:00 0
f5321000-f5400000 ---p f5321000 00:00 0
f546a000-f7523000 rw-p f546a000 00:00 0
f7523000-f7524000 ---p f7523000 00:00 0
f7524000-f7f24000 rwxp f7524000 00:00 0
f7f24000-f7f26000 rw-p f7f24000 00:00 0
f7f3a000-f7f3c000 rw-p f7f3a000 00:00 0
fffee000-ffffe000 rwxp fffee000 00:00 0                                  [stack]
ffffe000-fffff000 r-xp ffffe000 00:00 0
Aborted

[setiathome.berkeley.edu]# ldd KWSN-R2.2B-SSE3-C2
         (0xffffe000)
        libdl.so.2 => /lib/libdl.so.2 (0x00d36000)
        libm.so.6 => /lib/libm.so.6 (0x00d3c000)
        libpthread.so.0 => /lib/libpthread.so.0 (0x00d71000)
        libc.so.6 => /lib/libc.so.6 (0x00101000)
        /lib/ld-linux.so.2 (0x004a9000)


what kind of distribution is this ? Fedora Core ?
IF so try to disable SE Linux ....

Did you try the SSE3 app instead ?

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michael37
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #2 on: 26 Mar 2007, 08:57:12 pm »

what kind of distribution is this ? Fedora Core ?
IF so try to disable SE Linux ....

Did you try the SSE3 app instead ?



See above -- the base OS is FC5.

cat /etc/sysconfig/selinux
# This file controls the state of SELinux on the system.
# SELINUX= can take one of these three values:
#       enforcing - SELinux security policy is enforced.
#       permissive - SELinux prints warnings instead of enforcing.
#       disabled - SELinux is fully disabled.
SELINUX=disabled

Will try SSE3-P4 next.
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michael37
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #3 on: 26 Mar 2007, 09:06:53 pm »

SSE3-P4 seems to work.  Yes, I am sure this is a woodcrest which is a core 2 Smiley

Code:
# cat /proc/cpuinfo
processor       : 0
vendor_id       : GenuineIntel
cpu family      : 6
model           : 15
model name      : Intel(R) Xeon(R) CPU            5130  @ 2.00GHz
stepping        : 6
cpu MHz         : 1995.021
cache size      : 4096 KB
physical id     : 0
siblings        : 2
core id         : 0
cpu cores       : 2
fpu             : yes
fpu_exception   : yes
cpuid level     : 10
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl vmx tm2 cx16 xtpr lahf_lm
bogomips        : 3993.92
clflush size    : 64
cache_alignment : 64
address sizes   : 36 bits physical, 48 bits virtual
power management:

processor       : 1
vendor_id       : GenuineIntel
cpu family      : 6
model           : 15
model name      : Intel(R) Xeon(R) CPU            5130  @ 2.00GHz
stepping        : 6
cpu MHz         : 1995.021
cache size      : 4096 KB
physical id     : 0
siblings        : 2
core id         : 1
cpu cores       : 2
fpu             : yes
fpu_exception   : yes
cpuid level     : 10
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm constant_tsc pni monitor ds_cpl vmx tm2 cx16 xtpr lahf_lm
bogomips        : 3990.20
clflush size    : 64
cache_alignment : 64
address sizes   : 36 bits physical, 48 bits virtual
power management:



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s52d
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #4 on: 26 Mar 2007, 11:11:04 pm »

boinc log:

Unrecoverable error for result 13mr04aa.11639.16912.403412.3.83_0 (process got signal 6)
                                                                   
client 5.4.9, Slackware 11, Core 2 duo CPU, glibc-2.3.6.
                                                                                       
Next machine P4, sse2, Slackware 10.1. Works fine,.
                                         
Back to C2D, P4-SSE2, works fine.
                                                       
BR, thanks
Iztok                           

C2D /proc/cpuinfo:
processor       : 1
vendor_id       : GenuineIntel
cpu family      : 6
model           : 15
model name      : Intel(R) Core(TM)2 CPU          6600  @ 2.40GHz
stepping        : 6
cpu MHz         : 2397.759
cache size      : 4096 KB                                       
physical id     : 0
siblings        : 2       
core id         : 1     
cpu cores       : 2
fdiv_bug        : no
hlt_bug         : no
f00f_bug        : no
coma_bug        : no
fpu             : yes
fpu_exception   : yes
cpuid level     : 10
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36
bogomips        : 4795.54
clflush size    : 64
                                 
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s52d
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #5 on: 26 Mar 2007, 11:39:29 pm »

Aother C2D:

ldd KWSN-R2.2B-SSE
./KWSN-R2.2B-SSE: /lib/libc.so.6: version `GLIBC_2.3.4' not found (required by ./KWSN-R2.2B-SSE)

It is slack 9.1, glibc-2-3-2, back to ols one

Is 2.3.4 really needed, or simlink can do?

BR
Iztok
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michael37
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #6 on: 26 Mar 2007, 11:41:54 pm »

Aother C2D:

ldd KWSN-R2.2B-SSE
./KWSN-R2.2B-SSE: /lib/libc.so.6: version `GLIBC_2.3.4' not found (required by ./KWSN-R2.2B-SSE)

It is slack 9.1, glibc-2-3-2, back to ols one

Is 2.3.4 really needed, or simlink can do?

BR
Iztok

I don't have the details, but I suspect glibc 2.3.4 is really needed.  What kernel are you running on slack 9.1?  I suspect an OS which provides glibc-2.3.2 can't even properly take advantage of C2D CPUs.
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s52d
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Re: Problems with initial public release of Linux Core 2 Duo
« Reply #7 on: 26 Mar 2007, 11:53:23 pm »

[
Aother C2D:

ldd KWSN-R2.2B-SSE
./KWSN-R2.2B-SSE: /lib/libc.so.6: version `GLIBC_2.3.4' not found (required by ./KWSN-R2.2B-SSE)

It is slack 9.1, glibc-2-3-2, back to ols one

Is 2.3.4 really needed, or simlink can do?

BR
Iztok

I don't have the details, but I suspect glibc 2.3.4 is really needed. What kernel are you running on slack 9.1? I suspect an OS which provides glibc-2.3.2 can't even properly take advantage of C2D CPUs.


Hi!

uname -a
Linux lin 2.6.19.2I #4 SMP Tue Jan 23 12:18:04 CET 2007 i686 unknown unknown GNU/Linux

so CD works somehow....

C2D advantage: decent RAC. Main reason to get this box are some old apps, and I am not in the upgrade/debug mood: do not fix it if it is not broken.

Just checked: some other boxes have old glibc as well, while AMD 285 with slamd64 works fine
(SSE2-generic of course).

BR, 73
Iztok
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